PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773732.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 330aa    MW: 36630.7 Da    PI: 6.1647
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.43.3e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd llv +++++G+g+Wk+++   g+ R+ k+c++rw +yl
   XP_022773732.1 14 KGPWTPEEDILLVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding50.45.2e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E++ ++d+ ++lG++ W++Ia++++  Rt++++k++w+++l
   XP_022773732.1  67 RGSFTEHEEKMIIDLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
                      89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MGRPPCCVKV GVKKGPWTPE EDILLVSYIQ EHGPGNWKAV PTNTGLLRCS KSCRLRWTNY  60
LRPGIKRGSF TEHEEKMIID LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ  120
GSGGGYPRDG LSSSSSSSST SSHQNSRGQW ERTLQTDIQM AKQALSDALF PEKSSGLSEL  180
KPSNGYISYA KPGSYVSSTE NIAKLLEGWM RNPSKPASTN SAATQQSFDN MAGIDSASSE  240
GTRRMEDKSS IEMSEAFESL FFFESLDSSN SDFSQSMSPE ASLFQDESKP DPNAQGQLSL  300
LEKWLFDDGA NQGKDYQLSD ITLEENANFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-97MYB family protein