PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773827.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 285aa MW: 31802.7 Da PI: 8.8565

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773827.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.2e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l++++k +G g+W++ ++ g+ R++k+c++rw +yl XP_022773827.1 14 KGSWTKEEDERLINYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 799***************************99**********97 PP
2	Myb_DNA-binding	59.5	7.4e-19	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eEdel+++++ +lG++ W++Ia++++ gRt++++k++w++ XP_022773827.1 67 RGNFTEEEDELIIKLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNT 110 89******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRSPCCEKE HTNKGSWTKE EDERLINYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT RIKRKLYSRG 120 IDPQTHRPLN SVSSTVTIST NKTSNSNNNS STSSSCSFNN NNRFQLDMKY SAVPLMQVPA 180 NIKIGADSAE DSNSSSGVTT EEVFAQLNLE LSIGLPCQSQ VSSTNLNESQ RQQQVSYQLS 240 RPTTPAVCLC YGLGFQKSQV CSCSAMATTV PADSLYKYYS TSTNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-88	MYB family protein