PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773889.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 249aa MW: 28505.6 Da PI: 5.8028

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.1	9.8e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELS+LCda+va+iif stgkl+ey+s XP_022773889.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSILCDADVALIIFTSTGKLFEYAS 59 68***********************************************86 PP
2	K-box	51.3	5e-18	132	196	34	98
K-box 34 eqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++R++ Ge+L+ L+++eL+qLe+ Le +l+++ +kK + ++++i++lq+k +l een++L+ ++ XP_022773889.1 132 QNRQMRGEELQGLNFEELEQLEKSLEAGLSRVIEKKGQRIKNEIDDLQRKGMQLLEENERLKLQI 196 56***********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSILCD ADVALIIFTS TGKLFEYASS 60 SMKEILERHN LRSKNLEKLE QQPLELQLVE NSNLSMLTME VAEKSHQLRY TFILLLISLF 120 KLCIWIYCDF AQNRQMRGEE LQGLNFEELE QLEKSLEAGL SRVIEKKGQR IKNEIDDLQR 180 KGMQLLEENE RLKLQISNGQ PQVAGDSENM FCEEGQSSES VTNVCTSKGT PHDHESSDTS 240 LKLGLPYSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	5e-95	MIKC_MADS family protein