PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773891.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 224aa MW: 25425.8 Da PI: 5.4869

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.3	8.2e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKAeELS+LCda+va+iif stgkl+ey+s XP_022773891.1 9 KKIDNATARQVTFSKRRRGLFKKAEELSILCDADVALIIFTSTGKLFEYAS 59 68***********************************************86 PP
2	K-box	44.2	8.2e-16	105	171	32	98
K-box 32 qreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++R++ Ge+L+ L+++eL+qLe+ Le +l+++ +kK + ++++i++lq+k +l een++L+ ++ XP_022773891.1 105 SHQLRQMRGEELQGLNFEELEQLEKSLEAGLSRVIEKKGQRIKNEIDDLQRKGMQLLEENERLKLQI 171 4789***********************************************************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MAREKIQIKK IDNATARQVT FSKRRRGLFK KAEELSILCD ADVALIIFTS TGKLFEYASS 60 SMKEILERHN LRSKNLEKLE QQPLELQLVE NSNLSMLTME VAEKSHQLRQ MRGEELQGLN 120 FEELEQLEKS LEAGLSRVIE KKGQRIKNEI DDLQRKGMQL LEENERLKLQ ISNGQPQVAG 180 DSENMFCEEG QSSESVTNVC TSKGTPHDHE SSDTSLKLGL PYSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	1e-101	MIKC_MADS family protein