PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773900.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 233aa MW: 26791.5 Da PI: 9.8404

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773900.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	81.1	7.1e-26	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr+g++KKA+EL +LCdaev ++ifsstgk ye++s XP_022773900.1 10 RIDNSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLVIFSSTGKHYEFAS 59 8***********************************************86 PP
2	K-box	81.7	1.6e-27	81	170	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e+a L+++++nLq+++R+l+Ge L+ Ls+k+Lq+Le+qLe s++ +R kK++ll+++i+el ++ + +++en +L kk+ XP_022773900.1 81 NPTSEVKFWQREAAILRQQLHNLQENHRKLMGEHLSGLSVKDLQNLENQLEMSMRGVRMKKEQLLTDEIQELSRRGNLIHQENVELYKKV 170 567889*********************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRKGLIK KAKELAILCD AEVGLVIFSS TGKHYEFASS 60 SMKSVIERYS SMKEEHQQLL NPTSEVKFWQ REAAILRQQL HNLQENHRKL MGEHLSGLSV 120 KDLQNLENQL EMSMRGVRMK KEQLLTDEIQ ELSRRGNLIH QENVELYKKV NLIQKENMEL 180 YKKVYGTRDV NTSGGNALNS YGFDSGEGSD VPFHLRLSQP EAQTCNPPNR DKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	1e-106	MIKC_MADS family protein