PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773906.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 361aa MW: 40105.4 Da PI: 9.059

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773906.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8.3e-13	184	230	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++ErrRR+r+ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_022773906.1 184 DHIMAERRRRERLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYVKQLQ 230 699**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDSSSAKWLS EFGMDEYNII HQCHMNSLAE LASAEDIATA LAGGNLKQSF SSKNYSSYPN 60 FNTKNTASFS GSSIETSEVP TKQLKTSSSW NSIRTTEHVP QKPSSPTSQI LSFEKPTSLP 120 ANSQQFYKID KAVKPKDETV SSGNMNFSPR ITSGPYENIN YATKINQGIK RTCSMTRSPS 180 HAQDHIMAER RRRERLSQRF IALSAIVPGL KKMDKASVLG DAIKYVKQLQ ETLKVLEEQT 240 KKRTVESVVF VRKSQLSADN ESSSCEENSD GRSSNAALPE IEARVSDDDV LIRIHCEKQK 300 GLVAKILIEI ENLHLSVVNS SVLPFGNSTL DMTIIAQKDA EFKLTVKDLV KDLRVALLKF 360 M

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDSSSAKWLS EFGMDEYNII HQCHMNSLAE LASAEDIATA LAGGNLKQSF SSKNYSSYPN  60
FNTKNTASFS GSSIETSEVP TKQLKTSSSW NSIRTTEHVP QKPSSPTSQI LSFEKPTSLP  120
ANSQQFYKID KAVKPKDETV SSGNMNFSPR ITSGPYENIN YATKINQGIK RTCSMTRSPS  180
HAQDHIMAER RRRERLSQRF IALSAIVPGL KKMDKASVLG DAIKYVKQLQ ETLKVLEEQT  240
KKRTVESVVF VRKSQLSADN ESSSCEENSD GRSSNAALPE IEARVSDDDV LIRIHCEKQK  300
GLVAKILIEI ENLHLSVVNS SVLPFGNSTL DMTIIAQKDA EFKLTVKDLV KDLRVALLKF  360
M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	194	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	8e-70	bHLH family protein