PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773910.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 200aa    MW: 22506.6 Da    PI: 7.5837
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773910.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF54.71.3e-172158743
                    HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE.-TT CS
          SRF-TF  7 snrqvtfskRrngilKKAeELSvLCdaevaviif.sst 43
                      rqv fskRr g++KKA+EL++LC++e a+++f + +
  XP_022773910.1 21 DARQVAFSKRRSGLFKKASELCTLCAVETALVVFyARD 58
                    579*************************9988861444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MAGLSSKGRR RTQMWMIQGA DARQVAFSKR RSGLFKKASE LCTLCAVETA LVVFYARDQA  60
FYFGHPGVGT VMNTLSNCRK PNFDAIHQAE AEQEANLLEK LEAEKIQGER IIERFCMGSQ  120
KHGEDFVKRL VDKLNWEQLL TLKSLMEEYK EKLRKRMQEL SVELAAPTLI SAGESNASLS  180
GSTEGDSSAD PHYHVISHEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.18e-21M-type_MADS family protein