PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773916.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 314aa    MW: 34760 Da    PI: 5.0079
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.49.2e-151462148
                     TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd +l+d+++  G+g +W + + ++g++R++k+c++rw++yl
   XP_022773916.1 14 KGPWSPEEDAKLKDYIEANGTGgNWIALPPKIGLKRCGKSCRLRWLNYL 62
                     79*********************************************97 PP
2Myb_DNA-binding38.13.5e-1269111246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      g +++eEd ++  +    G++ W+ Ia+ ++ gRt++++k++w++
   XP_022773916.1  69 GGFSEEEDNIICSLYMSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111
                      569******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGRAPCCDKA NVKKGPWSPE EDAKLKDYIE ANGTGGNWIA LPPKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYMSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQQARRA SCLTLKQEMK IESENYMLSG MVSQVPYWPQ LPAVVPLTGT NQDPLDVSFA  180
QLDQLYENSS NMLSSASSIS PINSTCSQVT NSTHFNVSEA AGPNDMFQGF DAFPAALSEL  240
IYSNNQQILD GLESFYGTDN MVDGSSTVTS SAESSSWGDI NSLGYPQIFS GFEASQQCMP  300
QVPTFDEPNY FGPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49690.17e-77MYB family protein