PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773921.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 608aa MW: 65840.6 Da PI: 8.9224

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.6e-24	232	276	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_022773921.1 232 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKPVEG 276 79****************************************985 PP
2	QLQ	47.3	6.3e-17	162	198	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+ +L++Q l+yKy+ ++PvP++Ll +++k XP_022773921.1 162 GPFTPSQWIELEHQSLIYKYITFKVPVPSNLLIPLKK 198 59*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 608 aa Download sequence
MNFEVLGLEG IVGPNNGALS QTQPPSTPLL SAETKPKLVG SGFTMQERSF DSAEDHWKGS 60 KLPRTDDLLT PNTMPLQQGT PLLRSNSLVS ADTRQQEYIL SFSSLKSEVP SISKDGGFLE 120 RITQNNSFSY HQHTSSMYTR NAGYGSGGFN ANIHGPLTAV RGPFTPSQWI ELEHQSLIYK 180 YITFKVPVPS NLLIPLKKSL YPYGLSSSSA GSLPPNSLGW GSFHLGYSGT TDPEPGRCRR 240 TDGKKWRCSR DAVADQKYCE RHINRGRHRS RKPVEGQTGH AASGTTNSKV VQKISSGGAS 300 NNLTIAPQYQ FKNLQSGAAD PSADALVNRL FLKKEGVRGR IQEPQGLSMM SSATNLKSSD 360 SKFTITKQGI PFVESSQSDC GPVASDSLFN PLHRSSFMNY KEYGPFLDFT DQGTQDQNPL 420 RQFIDGWPKD QSCRSVITWP EELKSDWTQL SMSIPMGSSE FSSSSSSPAQ EKLAFSPLRL 480 SRELGPIQMN LGVNGDVNDQ HQKQANWIPI SWGSSMGGPL GEVLTNITSN VRGCKNTSPL 540 GLLSDGWGGS PQLRSSPTGV LQKAPFVSLS NSSSGSSPIA ENKKPYDGAS LCDDVLGSAL 600 ISSASIPL

Sequence ? help Back to Top

Protein Sequence Length: 608 aa Download sequence

MNFEVLGLEG IVGPNNGALS QTQPPSTPLL SAETKPKLVG SGFTMQERSF DSAEDHWKGS  60
KLPRTDDLLT PNTMPLQQGT PLLRSNSLVS ADTRQQEYIL SFSSLKSEVP SISKDGGFLE  120
RITQNNSFSY HQHTSSMYTR NAGYGSGGFN ANIHGPLTAV RGPFTPSQWI ELEHQSLIYK  180
YITFKVPVPS NLLIPLKKSL YPYGLSSSSA GSLPPNSLGW GSFHLGYSGT TDPEPGRCRR  240
TDGKKWRCSR DAVADQKYCE RHINRGRHRS RKPVEGQTGH AASGTTNSKV VQKISSGGAS  300
NNLTIAPQYQ FKNLQSGAAD PSADALVNRL FLKKEGVRGR IQEPQGLSMM SSATNLKSSD  360
SKFTITKQGI PFVESSQSDC GPVASDSLFN PLHRSSFMNY KEYGPFLDFT DQGTQDQNPL  420
RQFIDGWPKD QSCRSVITWP EELKSDWTQL SMSIPMGSSE FSSSSSSPAQ EKLAFSPLRL  480
SRELGPIQMN LGVNGDVNDQ HQKQANWIPI SWGSSMGGPL GEVLTNITSN VRGCKNTSPL  540
GLLSDGWGGS PQLRSSPTGV LQKAPFVSLS NSSSGSSPIA ENKKPYDGAS LCDDVLGSAL  600
ISSASIPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-102	GRF family protein