PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773932.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 230aa    MW: 25176.7 Da    PI: 8.2057
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773932.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260100.22e-312103197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l+p++     p++q +++ +v+k+FG++ ++++++a+pe++r+++++sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_022773932.1   2 SCNGCRVLRKGCSESCILRPCLqwiesPEAQGNATVFVAKFFGRAGLMSFISAVPESQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 96 
                     6********************************************************************************************** PP

          DUF260  91 kaelall 97 
                     +++++l+
  XP_022773932.1  97 AVDTVLR 103
                     9998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MSCNGCRVLR KGCSESCILR PCLQWIESPE AQGNATVFVA KFFGRAGLMS FISAVPESQR  60
PALFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVDT VLRGGVLRAM PELVAPTPTS  120
DEASEATCAN MWKLQETATN LNSNCRFSNS RSKVSPKRKR IQEFKKLQPS DLDLCLTPSF  180
TGKRVPDNRR SETPSMNSEE SVTTTCFESG FTDQQGQEVG ADKKLLNLFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.16e-93LBD family protein