PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022773933.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 456aa    MW: 50976.4 Da    PI: 5.5719
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022773933.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS305.81e-93534532373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.....fsevsPil 91 
                     ++lL++cA+a++s+d++l+q++L+ l+++a pdgd++qRl+  f++AL  r a+  s+++k l++ ++++ n s  ++ +++     f++++P++
  XP_022773933.1  53 EQLLVHCANAIESNDATLTQQILWVLNNIAPPDGDSNQRLTGAFLRALIVRAAK--SGTCKMLAAMANARCNLSIDFHTFSVielasFVDLTPWH 145
                     79****************************************************..8889999888888777444444444345577******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl. 181
                     +f++ +aN aIleaveg + vHi+D+++++++Q p+L++a+a+R egpp +++T+ g  +++       ++ee+g++L +fA++ ++ +ef+v+ 
  XP_022773933.1 146 RFGFTAANAAILEAVEGYSVVHIVDLSLTHCMQIPTLIDAIANRLEGPPLVKLTVAGGVTEDipplLDLTYEELGSKLVNFARSRNIMLEFRVVp 240
                     ********************************************************998888998889999**********************98 PP

            GRAS 182 ......vakrledleleeLrvkp.gEalaVnlvlqlhrll................desvsleserdevLklvkslsPkvvvvveqeadhnsesF 253
                            ++ +e+l++++L   + gEal++n++++lh+++                 e+ s++s r+ +Lk++++l P+vvv+v+++ad++s+++
  XP_022773933.1 241 ssyadgFTSLIEQLRVQHLVYAEsGEALVINCHMMLHYIPeetlsplpnpnsnpysFEPSSIQSLRTMFLKALRGLDPTVVVLVDEDADLTSNNL 335
                     884444444445555555554449*******************************9999999********************************* PP

            GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg 348
                     + r+ +a++y +  +d++++ lp+ s++r+++E+  + ++i+nv+a+eg +r+er e +++W +r+++a F+ ++++e+a++++k++l +++  g
  XP_022773933.1 336 VCRLRSAFNYLWIPYDTVDTFLPQGSKQRQWYEAD-ICWKIENVIAHEGLQRVERLEPKSRWVQRMRSANFRGISFGEDAVSEVKTMLDEHA-AG 428
                     ***********************************.********************************************************.89 PP

            GRAS 349 yrveeesgslvlgWkdrpLvsvSaW 373
                     + +++e++ lvl+Wk++++v+++aW
  XP_022773933.1 429 WGLKKEEDDLVLTWKGHNVVFATAW 453
                     99*********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MMQFTESPSQ PSHQITSFSI PTMNKNQIHR ARPWLGFPTS KGLGSFGDAN CMEQLLVHCA  60
NAIESNDATL TQQILWVLNN IAPPDGDSNQ RLTGAFLRAL IVRAAKSGTC KMLAAMANAR  120
CNLSIDFHTF SVIELASFVD LTPWHRFGFT AANAAILEAV EGYSVVHIVD LSLTHCMQIP  180
TLIDAIANRL EGPPLVKLTV AGGVTEDIPP LLDLTYEELG SKLVNFARSR NIMLEFRVVP  240
SSYADGFTSL IEQLRVQHLV YAESGEALVI NCHMMLHYIP EETLSPLPNP NSNPYSFEPS  300
SIQSLRTMFL KALRGLDPTV VVLVDEDADL TSNNLVCRLR SAFNYLWIPY DTVDTFLPQG  360
SKQRQWYEAD ICWKIENVIA HEGLQRVERL EPKSRWVQRM RSANFRGISF GEDAVSEVKT  420
MLDEHAAGWG LKKEEDDLVL TWKGHNVVFA TAWMPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.10.0GRAS family protein