PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773960.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 307aa MW: 33924 Da PI: 7.1318

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	138.9	1.7e-43	7	106	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrrkC+++Cv+apyfp ++p+kfanvhk+FGasnv kll++l+ ++reda++sl+yeAear+rdPvyG+vg+i+ lq++l+q++++l+ XP_022773960.1 7 PCAACKFLRRKCTQECVFAPYFPPDNPQKFANVHKVFGASNVAKLLNELNASQREDAVNSLAYEAEARLRDPVYGCVGLISILQHRLKQMQHDLN 101 7********************************************************************************************** PP DUF260 96 llkee 100 +k+e XP_022773960.1 102 NAKKE 106 99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MSSSNSPCAA CKFLRRKCTQ ECVFAPYFPP DNPQKFANVH KVFGASNVAK LLNELNASQR 60 EDAVNSLAYE AEARLRDPVY GCVGLISILQ HRLKQMQHDL NNAKKELSTY IGPQAMLPIL 120 QPPGFLQQHV GNASSPTVMQ HNMMPPMGFP IAAAASASHG GQLVIREPQQ QQQIFEAQQQ 180 LAAVIAAREQ QEMFRGYEQQ YNQGQQQEIV RFNSGFEGAN SVIATGFNQI TTAATMSPSL 240 TLGSFDNLYQ IQTQQQDHHH SHVGHPLQPQ LLLQPQGQQQ QQAQQNQQLH PQQSSGSEEG 300 RSIGPSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66870.1	1e-86	LBD family protein