PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022773981.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 210aa MW: 24164.4 Da PI: 8.1752

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022773981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2e-19	54	108	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++++eq++ Le F +++++ e++ +LA++lgL+ rqV vWFqNrRa++k+ XP_022773981.1 54 KKRKLSQEQVNLLELNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKN 108 45699************************************************95 PP
2	HD-ZIP_I/II	118.4	4e-38	54	144	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkr+ls+eqv+lLE +F +e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+ ++ ++ e++rLe+ev +L+e+l XP_022773981.1 54 KKRKLSQEQVNLLELNFGNEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKKLEEEYSKLKSVHEGVVLEKCRLESEVLKLKEQLC 144 9***************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MKTRVIEPED QMALIPQMYP GLYTPIAPQQ AGESKRRRRR KKNKGGESSL SGAKKRKLSQ 60 EQVNLLELNF GNEHKLESER KDRLASELGL DPRQVAVWFQ NRRARWKNKK LEEEYSKLKS 120 VHEGVVLEKC RLESEVLKLK EQLCEAEKET QRQAERGDGV SSNSPSSSLS MEAIDPPFLG 180 ELGADQGYED VFYISENSYI LGLEWMNLYM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	40	KRRRRR
2	35	41	KRRRRRK
3	35	56	KRRRRRKKNKGGESSLSGAKKR
4	35	57	KRRRRRKKNKGGESSLSGAKKRK
5	36	42	KRRRRRK
6	36	57	KRRRRRKKNKGGESSLSGAKKR
7	36	58	KRRRRRKKNKGGESSLSGAKKRK
8	37	58	KRRRRRKKNKGGESSLSGAKKR
9	37	59	KRRRRRKKNKGGESSLSGAKKRK
10	38	59	KRRRRRKKNKGGESSLSGAKKR
11	38	60	KRRRRRKKNKGGESSLSGAKKRK
12	39	61	KRRRRRKKNKGGESSLSGAKKRK
13	40	62	KRRRRRKKNKGGESSLSGAKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36740.1	1e-59	HD-ZIP family protein