PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774003.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 227aa    MW: 26438.1 Da    PI: 10.1885
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.69.3e-30958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvt+skRrngi+KKA+EL vLCda+v++i+fsstgkl+e+ 
  XP_022774003.1  9 KRIENSTNRQVTYSKRRNGIFKKAQELTVLCDAKVSLIMFSSTGKLREFV 58
                    79***********************************************7 PP
2K-box87.92e-2971168198
           K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLr 95 
                     yq++sg +l+++++e++q+++++L++ +++L+r +R+++G dL++L++keLq Le ++++sl  +R++K+++++ q+++ +kk ++l+e++ +L 
  XP_022774003.1  71 YQRTSGIDLWSSHYEKMQENYRRLEEINKKLRRDIRQRVGGDLNDLNIKELQALEAEMDSSLVAVRERKYHVIKLQTNTRKKKLRNLEERHANLV 165
                     789999***************************************************************************************98 PP

           K-box  96 kkl 98 
                       l
  XP_022774003.1 166 LHL 168
                     665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MGRGKIEIKR IENSTNRQVT YSKRRNGIFK KAQELTVLCD AKVSLIMFSS TGKLREFVSP  60
NISTKTFFDL YQRTSGIDLW SSHYEKMQEN YRRLEEINKK LRRDIRQRVG GDLNDLNIKE  120
LQALEAEMDS SLVAVRERKY HVIKLQTNTR KKKLRNLEER HANLVLHLEA KLDHQDGIVE  180
NEGYYESAIG VANGASNLYA FRLNQNQQPN FLLHHGGRFE SNDLRLA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.13e-73MIKC_MADS family protein