PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774017.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 226aa MW: 25657.3 Da PI: 9.0285

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774017.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.9	4.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEde+l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl XP_022774017.1 14 KGAWTREEDERLIAYIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	60.2	4.4e-19	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T eEdel+++++ +lG++ W+ Ia++++ gRt++++k++w+++ XP_022774017.1 67 RGNFTDEEDELIIKLHSLLGNK-WSIIAARLP-GRTDNDIKNHWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MGRSPCCEKG HTNKGAWTRE EDERLIAYIQ AHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDVKRGNF TDEEDELIIK LHSLLGNKWS IIAARLPGRT DNDIKNHWNT HIKRKLLSRG 120 IDPLTHRPIN EQTAIHSTDK VLSTKVLREA VKTNNELTCI NHSNPEGEKY PELNLELRIS 180 PPSSHPSQIV EKRDRRVTCF YCSLGLRNGK GCTSGAVEVE HLSFCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38620.1	2e-96	MYB family protein