PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774042.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 362aa MW: 39865.2 Da PI: 7.8064

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774042.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.6e-17	79	124	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+ ++ gRt+k+c++rw++ XP_022774042.1 79 RGHWKPAEDSKLKELVALYGPQNWNLIAENLQ-GRTGKSCRLRWFNQ 124 899***************************.*********996 PP
2	Myb_DNA-binding	54.9	2e-17	131	174	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++ +T+eE+e+l a++ +G++ W+ Iar ++ gRt++ +k++w+ XP_022774042.1 131 KKVFTEEEEERLMAAHRAYGNK-WAMIARLFP-GRTDNAVKNHWHV 174 5789****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MAFSYIIKCP CDLEEDGQNS EVAVHFSKGS ESIDGFGENN AAVSMEDMRR RMICMSEDNT 60 PCDGFLNGKD VGQSKVCARG HWKPAEDSKL KELVALYGPQ NWNLIAENLQ GRTGKSCRLR 120 WFNQLDPRIN KKVFTEEEEE RLMAAHRAYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY 180 RQQASAYSRR KLSQAANGNF TNPSNSPYLS SSVASNGSNY NKTSKKGDAS SGRDLLLGSK 240 SYNSLSPGEG ICKNQTSLDL FSDYSSQDGL ISRNSRQWNM LRDETTLAVS HPNSLPSQML 300 MQQSSNHQPS GFSDSIASAS QVTVTEPSSS SPSAAENTVA SHFDQTTSPS SPPFIDFLGV 360 GA

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MAFSYIIKCP CDLEEDGQNS EVAVHFSKGS ESIDGFGENN AAVSMEDMRR RMICMSEDNT  60
PCDGFLNGKD VGQSKVCARG HWKPAEDSKL KELVALYGPQ NWNLIAENLQ GRTGKSCRLR  120
WFNQLDPRIN KKVFTEEEEE RLMAAHRAYG NKWAMIARLF PGRTDNAVKN HWHVIMARKY  180
RQQASAYSRR KLSQAANGNF TNPSNSPYLS SSVASNGSNY NKTSKKGDAS SGRDLLLGSK  240
SYNSLSPGEG ICKNQTSLDL FSDYSSQDGL ISRNSRQWNM LRDETTLAVS HPNSLPSQML  300
MQQSSNHQPS GFSDSIASAS QVTVTEPSSS SPSAAENTVA SHFDQTTSPS SPPFIDFLGV  360
GA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26780.1	8e-73	MYB family protein