PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774070.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 303aa    MW: 34699.8 Da    PI: 10.1991
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.26.6e-171863147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + E e+l ++v+q+G+++W+ Ia+++  gR++k+c++rw++ 
   XP_022774070.1 18 RGHWRPAENEKLERLVEQYGPKNWNFIAQHFE-GRSGKSCRLRWYNQ 63
                     899*****************************.************96 PP
2Myb_DNA-binding50.54.7e-1670113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      ++++T+eE+e l+ a++  G++ W++Iar ++ gRt++ +k++++ 
   XP_022774070.1  70 KKPFTEEEEEMLLTAHRIQGNK-WASIARLFP-GRTDNAVKNHYHV 113
                      689*******************.*********.***********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGKFRGNSSD TSEKSCHRGH WRPAENEKLE RLVEQYGPKN WNFIAQHFEG RSGKSCRLRW  60
YNQLDPNINK KPFTEEEEEM LLTAHRIQGN KWASIARLFP GRTDNAVKNH YHVIMARRKR  120
AKLFFYCKRN EQRNPDHSNG NNISGKFERF LRPQPKCGSK LGFCRYHVTE RQGVTLLSSS  180
SSSSPSWLSG SIISRDSSGY YGGEIKDYVR TSDQDDLFVN TSGHNSFIGP KAVHLHHSFT  240
FSNFGNVFGS EGGNYCRRRV VKFNDNQSAP WNLHIVSRQN QGEGSILKHK DVPLIDFLGV  300
GIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33450.13e-67MYB family protein