PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774072.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 232aa    MW: 25995.3 Da    PI: 8.6419
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26098.47e-3118112194
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     aCaaCk++r+kC ++C+lapyfpa++ ++f++vhk+FG+sn +k++++++ ee r+++++sl++eA ++++d v G +g ++k+ ++    k + 
  XP_022774072.1  18 ACAACKHQRKKCDENCILAPYFPADKCREFQAVHKVFGVSNATKIVRNANSEEdRKKVADSLIWEAFCWQKDSVLGPYGEYKKIYEEFTLYKRQN 112
                     7***********************************************965555****************************9999887766554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MQRYNNNGVA AASGVHSACA ACKHQRKKCD ENCILAPYFP ADKCREFQAV HKVFGVSNAT  60
KIVRNANSEE DRKKVADSLI WEAFCWQKDS VLGPYGEYKK IYEEFTLYKR QNQMMLLQDH  120
NEPQVLKMAT AHAHAHAHAS ITPTWNINSN AKRLVDDVKG SIGNAALRCY NQQDAHGNSL  180
VGFSGSYGYP IPSHSEKLAV QEKGIHNPLQ YYTTSGLIHG KTLESARWDN VL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06280.16e-37LBD family protein