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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_022774090.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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| Family | GRAS | ||||||||
| Protein Properties | Length: 410aa MW: 44652.9 Da PI: 6.5134 | ||||||||
| Description | GRAS family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | GRAS | 359.3 | 5.8e-110 | 42 | 410 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96
+++++e+A + +g++ a ++L+rl + a+ +g++ qRl +++ AL++r+++ + + p+ e s+e++a ++l++++sP++++++l
XP_022774090.1 42 KQTIMEAASGIVEGKTDVAYEILTRLAQVANAKGNSEQRLMECMLLALKSRVNS----VENPPPVAEL---FSKEHAATTQLLYDLSPCFNLGFL 129
5789*************************************************9....4443333333...4999******************** PP
GRAS 97 taNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
+aN aIl+a+ + +++H+iDfdi+qG+Q+++Ll+aL++R++g+p +l+iTg+++ +g e+l+ +g++L+++Ae lgv f+fnv+++ +l+
XP_022774090.1 130 AANLAILDAILDQpscNKLHVIDFDIGQGGQYMNLLHALSERRSGKPaMLKITGIAD--NGGIERLKMVGDNLSRIAEGLGVCFKFNVVASLKLS 222
**********98888899**********************99966555*********..77***************************8888*** PP
GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
dl+ e+L ++p+E+laVn++++l+ ++desvs+e++r+e+L++vk+l P+vv++veqe+++n+++F+ r+ ea yy alfds+e+++pres++r
XP_022774090.1 223 DLSRESLCCEPDESLAVNFAFKLYXMPDESVSVENPRHELLRCVKGLGPRVVTLVEQEMNTNTAPFASRVGEAYGYYGALFDSIESTVPRESSDR 317
*********************************************************************************************** PP
GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
k+E+ l r+i n vaceg++r+er+e ++kWr r+++aGF+ pls+++a+ +++ l+ + + g++v+ee+g + +gW++r+L+++SaWr
XP_022774090.1 318 LKLEEG-LWRKIANSVACEGRDRVERCEVFGKWRTRMSMAGFELKPLSQSVAELMRATLNSGNcvNPGFTVKEENGGVSFGWMRRTLTVASAWR 410
******.9************************************************99998777689**************************8 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 410 aa Download sequence |
MFLYFVRSGS PISPIAPSPA SSITASSSSM SSVASPASTC SKQTIMEAAS GIVEGKTDVA 60 YEILTRLAQV ANAKGNSEQR LMECMLLALK SRVNSVENPP PVAELFSKEH AATTQLLYDL 120 SPCFNLGFLA ANLAILDAIL DQPSCNKLHV IDFDIGQGGQ YMNLLHALSE RRSGKPAMLK 180 ITGIADNGGI ERLKMVGDNL SRIAEGLGVC FKFNVVASLK LSDLSRESLC CEPDESLAVN 240 FAFKLYXMPD ESVSVENPRH ELLRCVKGLG PRVVTLVEQE MNTNTAPFAS RVGEAYGYYG 300 ALFDSIESTV PRESSDRLKL EEGLWRKIAN SVACEGRDRV ERCEVFGKWR TRMSMAGFEL 360 KPLSQSVAEL MRATLNSGNC VNPGFTVKEE NGGVSFGWMR RTLTVASAWR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G52510.1 | 1e-154 | GRAS family protein | ||||




