PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 410aa    MW: 44652.9 Da    PI: 6.5134
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS359.35.8e-110424102374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++++e+A  + +g++  a ++L+rl + a+ +g++ qRl  +++ AL++r+++    + +  p+ e     s+e++a ++l++++sP++++++l
  XP_022774090.1  42 KQTIMEAASGIVEGKTDVAYEILTRLAQVANAKGNSEQRLMECMLLALKSRVNS----VENPPPVAEL---FSKEHAATTQLLYDLSPCFNLGFL 129
                     5789*************************************************9....4443333333...4999******************** PP

            GRAS  97 taNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +aN aIl+a+  +   +++H+iDfdi+qG+Q+++Ll+aL++R++g+p +l+iTg+++  +g  e+l+ +g++L+++Ae lgv f+fnv+++ +l+
  XP_022774090.1 130 AANLAILDAILDQpscNKLHVIDFDIGQGGQYMNLLHALSERRSGKPaMLKITGIAD--NGGIERLKMVGDNLSRIAEGLGVCFKFNVVASLKLS 222
                     **********98888899**********************99966555*********..77***************************8888*** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ e+L ++p+E+laVn++++l+ ++desvs+e++r+e+L++vk+l P+vv++veqe+++n+++F+ r+ ea  yy alfds+e+++pres++r
  XP_022774090.1 223 DLSRESLCCEPDESLAVNFAFKLYXMPDESVSVENPRHELLRCVKGLGPRVVTLVEQEMNTNTAPFASRVGEAYGYYGALFDSIESTVPRESSDR 317
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk..sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      k+E+  l r+i n vaceg++r+er+e ++kWr r+++aGF+  pls+++a+ +++ l+  +  + g++v+ee+g + +gW++r+L+++SaWr
  XP_022774090.1 318 LKLEEG-LWRKIANSVACEGRDRVERCEVFGKWRTRMSMAGFELKPLSQSVAELMRATLNSGNcvNPGFTVKEENGGVSFGWMRRTLTVASAWR 410
                     ******.9************************************************99998777689**************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MFLYFVRSGS PISPIAPSPA SSITASSSSM SSVASPASTC SKQTIMEAAS GIVEGKTDVA  60
YEILTRLAQV ANAKGNSEQR LMECMLLALK SRVNSVENPP PVAELFSKEH AATTQLLYDL  120
SPCFNLGFLA ANLAILDAIL DQPSCNKLHV IDFDIGQGGQ YMNLLHALSE RRSGKPAMLK  180
ITGIADNGGI ERLKMVGDNL SRIAEGLGVC FKFNVVASLK LSDLSRESLC CEPDESLAVN  240
FAFKLYXMPD ESVSVENPRH ELLRCVKGLG PRVVTLVEQE MNTNTAPFAS RVGEAYGYYG  300
ALFDSIESTV PRESSDRLKL EEGLWRKIAN SVACEGRDRV ERCEVFGKWR TRMSMAGFEL  360
KPLSQSVAEL MRATLNSGNC VNPGFTVKEE NGGVSFGWMR RTLTVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.11e-154GRAS family protein