PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774162.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 295aa    MW: 33379.1 Da    PI: 6.6483
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.54.8e-161562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEd++l ++v q+G g+W++++   g+ R +k+c++rw +yl
   XP_022774162.1 15 KGLWSPEEDLKLRNYVLQHGHGCWSSVPINAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding55.71.1e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg +T++E+e ++ ++++lG++ W++Ia+ ++ gRt++++k++w++yl
   XP_022774162.1  68 RGMFTPQEEETILALHHLLGNK-WSLIAKNLP-GRTDNEIKNYWHSYL 113
                      789*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MGCKSADKPK AKHRKGLWSP EEDLKLRNYV LQHGHGCWSS VPINAGLQRN GKSCRLRWIN  60
YLRPGLKRGM FTPQEEETIL ALHHLLGNKW SLIAKNLPGR TDNEIKNYWH SYLKKRVAKF  120
EEMEAQTRTR YTNSSSENTE STVSPQNLTD QIPSYESFQH IEKSSMTTDQ AVPQHFDFAK  180
EPHRSSLPKL LFAEWLSLDQ EGGSFSNSGK PVASSDGLNH GSSSNFQDPF MNAYLSNEGA  240
FGSDFHDGLS NASVNEMFSS QFKFETQISG NEFVVSISGD DICHDFNIND DVMYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.11e-61MYB family protein