PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774396.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 230aa MW: 25763.1 Da PI: 5.4361

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.8e-12	65	117	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +h +Er+RR+++ s ++ Lr+llP +K + ++ Av YIk+Lq XP_022774396.1 65 KKSMHRDIERQRRQEMASLYASLRTLLPLeY---IRGKRTISDHMNGAVTYIKDLQ 117 6899***********************77...*******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MDEIFFQIPS NSDPQNTTPQ DKILDYVPEG GRSGSNLYSN MGSRSQQRKF LASDQKENSN 60 DDDKKKSMHR DIERQRRQEM ASLYASLRTL LPLEYIRGKR TISDHMNGAV TYIKDLQKRI 120 DELSAKRDEL KKLLDATGFD QRMSSKNSFP SSAVVRLSLD GVEVVISTGL GAQALTLSRV 180 LELLLEEGLD VVNCISTRID GGLIHTVQSE VSDLTCVDVP GLEQKLNKEI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	5e-39	bHLH family protein