PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774405.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 199aa MW: 23103.8 Da PI: 7.5024

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.9	1.7e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd +l+++++ +G g+W+ a+ g++Rt+k+c++rw++yl XP_022774405.1 15 KGPWTMEEDWILINYIANHGEGDWNNLAKAAGLKRTGKSCRLRWLNYL 62 79********************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE+ l+ ++++++G++ W++Ia++++ gRt++++k++w++ XP_022774405.1 68 RGNITPEEQCLIMELHAKWGNR-WSKIAKHLP-GRTDNEIKNYWRT 111 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MDKKPCNSQE VEVRKGPWTM EEDWILINYI ANHGEGDWNN LAKAAGLKRT GKSCRLRWLN 60 YLRPDVRRGN ITPEEQCLIM ELHAKWGNRW SKIAKHLPGR TDNEIKNYWR TRIQKHINKQ 120 AEICSSQSNS DLLAHQASTS QLPCNSTTNF METYSPTSSS FNHFNIEAFP GQQHTVDQSN 180 YESCWSMEDI WSMQLLNGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	8e-87	MYB family protein