PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774538.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 285aa MW: 32333.1 Da PI: 5.7925

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv+ + +G +W+++++ g++R++k+c++rw +yl XP_022774538.1 14 KGPWTAEEDKKLVNFILTHGQCCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	44.5	3.5e-14	71	126	5	47
-HHHHHHHHHHHHHTTTT..............-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGgg..............tWktIartmgkgRtlkqcksrwqky 47 ++E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_022774538.1 71 NEDEEQLVIDLHARLGNRllnflfdifsdhyhWWSKIAARLP-GRTDNEIKNHWNTH 126 589*************************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLVNFIL THGQCCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL NEDEEQLVID LHARLGNRLL NFLFDIFSDH YHWWSKIAAR LPGRTDNEIK 120 NHWNTHIKKK LIKMGIDPVT HEPLQKPDTP QGATCSSQAN DQTNLDPSQL ELPKHSGHVS 180 STTDEFSLPT ENSSTDESRS SSESGSDDDL LMNLTWSEPF LNDLPWNFPG PDSREEYSEL 240 GFSLSEEISF SRFLDYQNIG DDHQSFGFGG FSGIGMNSLD MAGKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	8e-83	MYB family protein