PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774549.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 753aa MW: 86245 Da PI: 5.5051

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774549.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	100.1	2.4e-31	77	172	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r+e++++ ++k+rr r+ tr gCka ++v+++++gkw+v+kle++HnHel XP_022774549.1 77 NFYNAYAKQMGFSIRVNSYYRSKKDNSIISREFCCSKEGFRREKRSRnvdsgdDTKRRRVRPITREGCKALMTVRRRDNGKWYVAKLEKNHNHEL 171 6***************************************99988999999***********************************9 PP FAR1 90 a 90 + XP_022774549.1 172 V 172 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MEEEPSSEGK EIVDSYVGLE DEGDGCCVVE DNENHMVSDD HGKEDEQLNL EFSQHSVGGG 60 LEPTLGMEFT SEDDARNFYN AYAKQMGFSI RVNSYYRSKK DNSIISREFC CSKEGFRREK 120 RSRNVDSGDD TKRRRVRPIT REGCKALMTV RRRDNGKWYV AKLEKNHNHE LVTPAMRHFL 180 RSRKEEDDPK KSPSDSISFL GVGVNASVNI LTEEGNSFGK LGFAAQNKVN FTGRGRLSNF 240 GVDAQSLIGF FKVMQTSDPA FYYAIQVDEE DRLSSVFWVD TRSRIAYNCF SDVLSFDTTY 300 LVNQYKMPFA PFIGVNHYRQ SVLFGCALLA DETESTFIWL FTTWLEAMSG HQPGLIVTDY 360 DSAITRAVES VFPQSSHRYC KWHILSKMPK EVGLVYSSLP KAFQVQFDKC INKSEIPEEF 420 ESAWQLLLDK YSLRGNEWLQ SLYIDRKLWV PTYVRDSFFA GLYSTWRSKS VNSLFDGYVN 480 AGTTLQDFAE QYEQALNDRY EKEVRAEFET FYTKPVLKTP LPMEIQAAQV YTRKLFSLFQ 540 DEIYESLVLA VKLSQEDGLS KTYEVARFDE EHKVHLVGLN MVEQIASCSC KMFEFEGILC 600 RHVIAVFKAT NIFLLPQHYI LKRWTRNAKD EAMLDEVPSV EMHGNPQKGK NSQYNLLYRE 660 AVKCAEEGMA SDHSFKVAVN ALREARIKIV NAKKNAINAW KLETVASTNY EDENTTVANQ 720 VDGSLELINL ADHQQAKMRD SFAENNIAKQ SSE

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MEEEPSSEGK EIVDSYVGLE DEGDGCCVVE DNENHMVSDD HGKEDEQLNL EFSQHSVGGG  60
LEPTLGMEFT SEDDARNFYN AYAKQMGFSI RVNSYYRSKK DNSIISREFC CSKEGFRREK  120
RSRNVDSGDD TKRRRVRPIT REGCKALMTV RRRDNGKWYV AKLEKNHNHE LVTPAMRHFL  180
RSRKEEDDPK KSPSDSISFL GVGVNASVNI LTEEGNSFGK LGFAAQNKVN FTGRGRLSNF  240
GVDAQSLIGF FKVMQTSDPA FYYAIQVDEE DRLSSVFWVD TRSRIAYNCF SDVLSFDTTY  300
LVNQYKMPFA PFIGVNHYRQ SVLFGCALLA DETESTFIWL FTTWLEAMSG HQPGLIVTDY  360
DSAITRAVES VFPQSSHRYC KWHILSKMPK EVGLVYSSLP KAFQVQFDKC INKSEIPEEF  420
ESAWQLLLDK YSLRGNEWLQ SLYIDRKLWV PTYVRDSFFA GLYSTWRSKS VNSLFDGYVN  480
AGTTLQDFAE QYEQALNDRY EKEVRAEFET FYTKPVLKTP LPMEIQAAQV YTRKLFSLFQ  540
DEIYESLVLA VKLSQEDGLS KTYEVARFDE EHKVHLVGLN MVEQIASCSC KMFEFEGILC  600
RHVIAVFKAT NIFLLPQHYI LKRWTRNAKD EAMLDEVPSV EMHGNPQKGK NSQYNLLYRE  660
AVKCAEEGMA SDHSFKVAVN ALREARIKIV NAKKNAINAW KLETVASTNY EDENTTVANQ  720
VDGSLELINL ADHQQAKMRD SFAENNIAKQ SSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	132	136	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein