PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022774646.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25320.8 Da    PI: 10.0512
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022774646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81e-31958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifss+g+lyey+
  XP_022774646.1  9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIIFSSRGRLYEYA 58
                    79***********************************************8 PP
2K-box108.85.9e-36781735100
           K-box   5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +  s++ea+++ +qqe++kL+++i+  q+ +Rh++Ge+L+sL++keL++Le +Lek++++iRskKnell+++ie +qk+e elq++n++Lr+k++
  XP_022774646.1  78 NPGSVAEANTQFYQQEATKLRRQIRDAQNMNRHIVGESLSSLTFKELKNLEGRLEKGISRIRSKKNELLVAEIEFMQKREVELQNDNMYLRAKIA 172
                     444599***************************************************************************************98 PP

           K-box 100 e 100
                     e
  XP_022774646.1 173 E 173
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIIFSS RGRLYEYANN  60
SVRATIDRYK KACSDASNPG SVAEANTQFY QQEATKLRRQ IRDAQNMNRH IVGESLSSLT  120
FKELKNLEGR LEKGISRIRS KKNELLVAEI EFMQKREVEL QNDNMYLRAK IAENERAQQQ  180
SNLIQGSVYQ TATSQPYNRN FLPVNLQLEP NQDQTALQLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.11e-128MIKC_MADS family protein