PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022774966.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 193aa MW: 22189.6 Da PI: 9.8849

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022774966.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.7	1.8e-15	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++ Ed++l d+++++G g+W++ ++ g+ R++k+c++rw +yl XP_022774966.1 13 KGAWSKLEDQKLTDYIRKHGEGCWRSLPQAAGLLRCGKSCRLRWVNYL 60 79****************************99**********97 PP
2	Myb_DNA-binding	55.2	1.6e-17	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ ++E+el+++++++lG++ W++Ia +++ gRt++++k++w+++ XP_022774966.1 66 RGNFGEDEEELIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNTH 110 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MRKPCCEKKE TNKGAWSKLE DQKLTDYIRK HGEGCWRSLP QAAGLLRCGK SCRLRWVNYL 60 RPDLKRGNFG EDEEELIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNTH IKRKLLQMGI 120 EPNNRRSLLS RIITKSNFSN VFNSDNQPLK SASASEVICT RLPDLNLDLT IAPPLMEEKQ 180 LINLESTQVG YNV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	7e-78	MYB family protein