PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775003.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 329aa MW: 37134.9 Da PI: 4.7661

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.4	5.8e-19	57	110	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_022775003.1 57 KKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 110 566899***********************************************9 PP
2	HD-ZIP_I/II	127.9	4.4e-41	56	148	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrls +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy Lk++y++lk + e+L++++e+L +e++e XP_022775003.1 56 EKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKTSYESLKVNFETLQHDNEALLKEIRE 148 69*************************************************************************************999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MKRLGSSGSL GALISICPTT EERSPRNDHI YSREFQSMID GIDEEGCVEE SGHVAEKKRR 60 LSVDQVKALE KNFEVENKLE PERKVKLAQE LGLQPRQVAV WFQNRRARWK TKQLERDYGL 120 LKTSYESLKV NFETLQHDNE ALLKEIRELK AKLNGESTES NISVKKEVIV PETDNKTLEQ 180 SEPHPVSSLA TSSEPAELNY ESFKNSNGSV GATLFPDLKD GSSDSDSSAI LNEDNNNTNN 240 SPNNAAISSS EVLQSQHLWM SSTTSSLNFN SSSSSPSSIN CFQFSKTTYQ PHQYVKMEEQ 300 NFFTADEACN FFSDEQAPSL HWYCPEQWN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	86	KKRRLSVDQVKALEKNFEVENKLEPERKVK
2	105	113	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22430.1	4e-63	HD-ZIP family protein