PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775004.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 317aa MW: 35563 Da PI: 6.8574

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775004.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	3.9e-13	117	167	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r++h ++Er+RR+++N+ ++ Lr+++P++ + ++ + a+i A++++++L XP_022775004.1 117 QRMTHIAVERNRRRQMNDYLAVLRSMMPTS---YVQRGDQASIIGGAINFVNEL 167 79**************************...9*************99988 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MALEAVVFQQ DPFSYGCRDF HSFGGESGTF SYDTAFQQQE EKAYCSTEET PTKSRGFGFS 60 AVVHQPLKEW NSKSSSQDNV FVTGGLPPVE SPLDASSFRR KRRRTKSVKN REEIENQRMT 120 HIAVERNRRR QMNDYLAVLR SMMPTSYVQR GDQASIIGGA INFVNELEHL LQSLEARKRL 180 EERSENSSLS SLFSDFFFFP QYSTGSTGTH LSCAAAAGKP MAEKRSSAVA DVEVTMVESH 240 ANLKILSKRH PKQLLKMVSA LHSLGLFVLH LNVTSVENIV LHSFSVKVED NCELTTVNEI 300 AAAVYEMVDR FQEEAPA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	100	104	RKRRR
2	100	105	RKRRRT
3	118	129	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-73	bHLH family protein