PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775151.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 312aa    MW: 33982.1 Da    PI: 6.3997
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775151.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.24.4e-191661147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     +g+W++ Ed+ll ++v+++G+g+W++I++ ++ gR++k+c++rw + 
   XP_022775151.1 16 KGPWSPHEDDLLQKLVQKHGPGNWSLISKSIP-GRSGKSCRLRWCNQ 61
                     79******************************.***********985 PP
2Myb_DNA-binding50.54.8e-1670112347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      ++T+eE e +++a+++ G++ W+tIar +  gRt++ +k++w++ 
   XP_022775151.1  70 AFTPEENETIIRAHARIGNK-WATIARLLD-GRTDNAIKNHWNST 112
                      79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MAVTSTSNRK EIDRIKGPWS PHEDDLLQKL VQKHGPGNWS LISKSIPGRS GKSCRLRWCN  60
QLSPQVEHRA FTPEENETII RAHARIGNKW ATIARLLDGR TDNAIKNHWN STLKRKCLSV  120
REECNFMTNG GYDGNLEGEE RQPLKRSVSV GLYMSPGSPS GSDMSDSSVL VLSSSHVYKP  180
IPRTGGVNVN VDVDVNVMPA GVEAASSTSI DPPTSLSLSL PGAESCEVSI NRVTESTQIR  240
NEAKNEGRGG GVMGFSAEFM AVMQEMIRVE VRNYVVQMQQ QNGGVSGGEM DMCLDGGFGN  300
VNGYEPSCGE HD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.13e-94MYB family protein