PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775279.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 563aa    MW: 63816.4 Da    PI: 6.9489
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS311.91.4e-952065622374
            GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     +e L+++A ++++++l+laq +Larl+++ +sp+g+p+qR+a+yf+eAL++ l++      ++ +++ +s+++ +++++a+k+fs + Pi+ f h
  XP_022775279.1 206 IEELIRAAGCFDTNQLQLAQVILARLNQRlQSPSGKPLQRAAFYFKEALQSLLTG------STGSTRLSSWSEIVQTIKAYKTFSGINPIPMFNH 294
                     678*************************99*************************......778888999999********************** PP

            GRAS  96 ltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +t+NqaIlea++g    +HiiDfdi+ G+Q+++L++++a+ + ++   +RiT+v+++e   + +++ ++++L +fA+ l+++f++++++ +++e+
  XP_022775279.1 295 FTTNQAILEALDGPaPLIHIIDFDIGLGGQYASLMREMAENNdHSCKFIRITAVVPEE--YAIQTRLIKDNLFQFAQDLKLRFQIEFVLLRTFEM 387
                     *************97899*********************999566679********66..8999999**************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adhnsesFlerflealeyysalfdsleaklpresee 281
                     l+++++++ +gE +a+ l  +++r l  +++     +++L+ +++++P vvv+v++e  ++  ++sF + f++ le+y+++f+sl+a +    e+
  XP_022775279.1 388 LSFKAFKFINGEQTAILLCQSIFRCL--NLN----VTAFLSDFRRVNPSVVVFVDSEvwMESRTTSFRKNFVNGLEFYAMIFESLDAAV-VGGEW 475
                     *************************9..333....367*******************66666889********************9996.67799 PP

            GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +k+E  ll+++i  vv ++ ++      t+  Wre + +aG+++v+ls++a+ qa++ll+k +++g++v +++++l l+W+dr+Lv++SaWr
  XP_022775279.1 476 VKKIETLLLRPRILAVVEAAWRR------TAPPWREVFCRAGMRAVHLSQFAYFQAESLLAKLPVRGFHVAKRQAELALCWHDRSLVATSAWR 562
                     9****************887776......89*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MRVPVTSPQN NPSPTPKPNN NNSNNNSVVS SRNISFHGLN SVPTSCHEPT SFLDLPRSSS  60
PVHEKPASSP ADVSYCVSVS NPHPHHHHHH HSLEWDEHVL RNMDWDSIMK DSGLDDESML  120
AIKTNNPQAI TPCENHIQSL PEFMSCDLNH HSVHPDFNNL YDFYSGLNQD PSHQNFNTAT  180
NNYLDNISNS CNFHNVGNFN LGFDFIEELI RAAGCFDTNQ LQLAQVILAR LNQRLQSPSG  240
KPLQRAAFYF KEALQSLLTG STGSTRLSSW SEIVQTIKAY KTFSGINPIP MFNHFTTNQA  300
ILEALDGPAP LIHIIDFDIG LGGQYASLMR EMAENNDHSC KFIRITAVVP EEYAIQTRLI  360
KDNLFQFAQD LKLRFQIEFV LLRTFEMLSF KAFKFINGEQ TAILLCQSIF RCLNLNVTAF  420
LSDFRRVNPS VVVFVDSEVW MESRTTSFRK NFVNGLEFYA MIFESLDAAV VGGEWVKKIE  480
TLLLRPRILA VVEAAWRRTA PPWREVFCRA GMRAVHLSQF AYFQAESLLA KLPVRGFHVA  540
KRQAELALCW HDRSLVATSA WRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-158GRAS family protein