PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775312.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 609aa    MW: 67082.7 Da    PI: 4.9552
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS379.15.3e-1162436093374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     ++Ll+cA++  +++ ++a + L rl+e a ++gdp++R+a+yfteAL +r++    +  k l++ et+    +e + ++k++++++P+lkf+h+t
  XP_022775312.1 243 KALLDCARFA-ESEPQRAIKSLVRLRESAFERGDPTERVAFYFTEALYSRVSL---QAEKRLAMLETT---LEEFTLSYKALNDACPYLKFAHFT 330
                     78******65.55889999999******************************9...777888888887...999********************* PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     aNqaIlea+e+e+++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p  g   + +l +tg+rL++fA+ l+++fef++ + + +++l
  XP_022775312.1 331 ANQAILEATERESKIHIVDFGIAQGVQWAALLQALATRSAGKPtRIRISGIPAPVLGksPALSLCATGNRLRDFAKLLDLNFEFEP-ILTPIKEL 424
                     ***************************************77666*********999877888999*********************.799***** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     + +++rv+++E+laVn+vlql++llde + + +   + L l ksl+Pk+v++ e ea++n++ F +rf +al+yysalf+sle +lpr+s+eri 
  XP_022775312.1 425 NGSSFRVDEDEVLAVNFVLQLYNLLDEALITVE---TALCLAKSLNPKIVTLGEYEASLNRAGFENRFKNALRYYSALFESLEPNLPRDSQERIQ 516
                     *************************99988888...9********************************************************** PP

            GRAS 285 vErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                     vEr llgr+i+ v+  e+ae rrer+e +e+W+  +e+aGF++v+ls +a +qa+ ll +++ s  y++ e++  ++ l W++ pL++vS+Wr
  XP_022775312.1 517 VERLLLGRKISGVIGPEEAEnRRERMEDKEQWKVLMETAGFETVALSRYAISQARILLWNYNySSSYSLIESQPGFLsLAWNNVPLLTVSSWR 609
                     ***************999988*****************************************9999**9999988888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    
MAYMFPDSGN LMAIAQQVIK QKQQQEQQEQ QLHRQQQQLL GLSPFSLNPS PNTHHGVSSS  60
PNLGYGLSGT GFADPFQGYI GEGFQLPNME YHSSGFRFPD FCGGVGGMFD SNECMDSLMN  120
GGDSTDSSNL PSGCDAWQNN ADFGLCGADP FTACPNRLSV ACSTPSDLNR AIFSTEAQQN  180
PSSTLQAQSQ LPAWPPSPPP SPPQVTVKKT KTSSPPSQTP PQNDAAGLSS GSLGTESAPP  240
VLKALLDCAR FAESEPQRAI KSLVRLRESA FERGDPTERV AFYFTEALYS RVSLQAEKRL  300
AMLETTLEEF TLSYKALNDA CPYLKFAHFT ANQAILEATE RESKIHIVDF GIAQGVQWAA  360
LLQALATRSA GKPTRIRISG IPAPVLGKSP ALSLCATGNR LRDFAKLLDL NFEFEPILTP  420
IKELNGSSFR VDEDEVLAVN FVLQLYNLLD EALITVETAL CLAKSLNPKI VTLGEYEASL  480
NRAGFENRFK NALRYYSALF ESLEPNLPRD SQERIQVERL LLGRKISGVI GPEEAENRRE  540
RMEDKEQWKV LMETAGFETV ALSRYAISQA RILLWNYNYS SSYSLIESQP GFLSLAWNNV  600
PLLTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein