PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775485.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family SBP
Protein Properties Length: 189aa    MW: 22044.8 Da    PI: 7.1891
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775485.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP129.99.1e-4191168178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +Cqv++C adl++ak+yhrrhkvCe h+ka+ vlv+g++qrfCqqCsrfhe+sefD +krsCr+rLa+hnerrrk ++
  XP_022775485.1  91 CCQVDECGADLKDAKQYHRRHKVCERHAKAAFVLVKGIRQRFCQQCSRFHEISEFDGAKRSCRDRLAGHNERRRKVHP 168
                     6**************************************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MTPGKRRFLC WVTMTLCVLW SFKTLEGIED DSETEKESEL EEEETESEHE EQQREERKVM  60
IRVVPRERFE RRNLIEHSHS ASCGGGGNLF CCQVDECGAD LKDAKQYHRR HKVCERHAKA  120
AFVLVKGIRQ RFCQQCSRFH EISEFDGAKR SCRDRLAGHN ERRRKVHPDQ QAEDDIKLTG  180
LGPCNVARV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53160.18e-38SBP family protein