PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775498.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

LBD

Protein Properties

Length: 296aa MW: 33193.1 Da PI: 6.3835

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	122.4	2.5e-38	10	108	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkC ++C+lapyfpa+q+k f+n+hklFG+sn+ k+lk+l+++++ +am+s+ y+A++r r PvyG++gvi++l q++ l++e + XP_022775498.1 10 ACAACKYQRRKCIPECPLAPYFPADQTKVFQNAHKLFGVSNIGKILKSLDPSQHAEAMRSVKYQANVRDRFPVYGCLGVIRQLYYQIQLLEEEFH 104 7*******************************************************************************************998 PP DUF260 96 llke 99 ++ + XP_022775498.1 105 AVLA 108 8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 296 aa Download sequence
MTLKGGTTSA CAACKYQRRK CIPECPLAPY FPADQTKVFQ NAHKLFGVSN IGKILKSLDP 60 SQHAEAMRSV KYQANVRDRF PVYGCLGVIR QLYYQIQLLE EEFHAVLAQL EMYRQHHHHH 120 HQQHQISSLP DDVPSQLELA MAPPSNSLPF FNQVPAQPYT NVSAMPVSMQ HSYSSSNNVG 180 YSPSYMDSAE NVGNNYLWIQ HPFLATNSNT SSNNGSSMAI QSQMLVPNSQ PEVVQDYNEI 240 HSFIDTIDDR QSYIDSKEAY DSRSEESLKD TTQSMEHVAV NELKSAAACL SLTSVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47870.1	1e-63	LBD family protein