PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022775502.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 658aa    MW: 72938.3 Da    PI: 5.6987
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022775502.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS432.63e-1322926571374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar...svselykalppsetseknsseelaalklfsevsPilk 92 
                     lv+lLl+cAeav+++d  la++++ +l+  ++p gd+mqR+a++fteAL+arla    + +++++a +p +  ++ns e+l+++++ ++++P++k
  XP_022775502.1 292 LVHLLLACAEAVAKEDYLLARKYIHHLNRVVTPLGDSMQRVASCFTEALSARLAAnitTDPSTSSAPKPYSPFPSNSFEVLKIYQIVYQACPYIK 386
                     68***************************************************99532345677777777777889******************* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     f+h+t NqaI ea+e eervH+iD+di qG QWpa++qaLa+Rp+g+p lRiTgvg+    s e+++etg+ L+++A +l++pfef++ + ++le
  XP_022775502.1 387 FAHFTSNQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPSGAPFLRITGVGP----SLETIKETGRSLTELAYSLHIPFEFHP-IGEQLE 476
                     *********************************************************....9**************************.7***** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     d+++++++ + gEalaVn v +lhr++    +l     ++L ++++  P++v++veqea+hn++ Fl rfleal+yysa+fdsl+a++p++s +r
  XP_022775502.1 477 DIKPHMFNRRVGEALAVNAVNRLHRVP--GNCLG----NLLAMIRDQAPNIVTIVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPDSAQR 565
                     **************************9..44444....5******************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +kvE+ ++++ei+++vaceg+er+erhe+lekWr+ +e  GFk vpls +a++q k ll  ++ dgyr+ e++g+l+lgW+dr++vs+SaWr
  XP_022775502.1 566 AKVEQYIFAPEIRSIVACEGSERIERHERLEKWRKLMEGKGFKGVPLSANAVTQSKILLGLYSCDGYRLTEDKGCLLLGWQDRAIVSASAWR 657
                     *******************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    
MNMINSLCGS MGSIKSENSC ESIAESKKTT PSDLEQNSLT PPSLNFPAVK FELDGDVEVQ  60
SPDSSLWETF FSDHFDSDFM ISSPVRNLPS PLISSYNFNN VQAMQGQSLS GCSPPRFSSQ  120
LGSFSSTYKG KGQSPLHRVF NSPNNQFMQV ESLSLPAIEQ ILDDYQKDGY GEYPTTKISA  180
IGTSNNMFEM STTAPGMLDC MSMPNSSRFC GSASETSSSA GCSQLTQEQH YQVNSVSRAP  240
LSQQLQQEHQ QEKRQLAAAP QQQQQQHQNL GHTLMVPIPV GPEQEQDSGL QLVHLLLACA  300
EAVAKEDYLL ARKYIHHLNR VVTPLGDSMQ RVASCFTEAL SARLAANITT DPSTSSAPKP  360
YSPFPSNSFE VLKIYQIVYQ ACPYIKFAHF TSNQAIFEAF EAEERVHVID LDILQGYQWP  420
AFMQALAARP SGAPFLRITG VGPSLETIKE TGRSLTELAY SLHIPFEFHP IGEQLEDIKP  480
HMFNRRVGEA LAVNAVNRLH RVPGNCLGNL LAMIRDQAPN IVTIVEQEAS HNGPYFLGRF  540
LEALHYYSAI FDSLDATFPP DSAQRAKVEQ YIFAPEIRSI VACEGSERIE RHERLEKWRK  600
LMEGKGFKGV PLSANAVTQS KILLGLYSCD GYRLTEDKGC LLLGWQDRAI VSASAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.11e-102GRAS family protein