PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775553.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 321aa MW: 36367.5 Da PI: 4.6612

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.9	1.7e-18	85	139	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k++++t++q++ Le+ Fe ++++ e++ +LAk+lgL+ rqV +WFqNrRa+ k+ XP_022775553.1 85 KKRRLTATQVQFLERSFEFENKLEPERKLQLAKELGLQPRQVAIWFQNRRARFKN 139 56689***********************************************995 PP
2	HD-ZIP_I/II	126.8	9.2e-41	85	174	2	91
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 kkrrl++ qv++LE+sFe e+kLeperK +la+eLglqprqva+WFqnrRAR+k+kqlEkdy++Lk++yd+lk++ ++L +e+++L++e+ XP_022775553.1 85 KKRRLTATQVQFLERSFEFENKLEPERKLQLAKELGLQPRQVAIWFQNRRARFKNKQLEKDYDSLKASYDKLKADYDSLLEEKDDLKNEI 174 9**************************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MVGCKICASP NMNALLQSEQ LSCSSELIES LWIPSSSSAL QGRKPIFDYE NVNGVETTDM 60 PFFQPLDKEE NGDDGFDESR HPPGKKRRLT ATQVQFLERS FEFENKLEPE RKLQLAKELG 120 LQPRQVAIWF QNRRARFKNK QLEKDYDSLK ASYDKLKADY DSLLEEKDDL KNEILALKEK 180 LLTRAKGGEN LESLGAINSS DAGPQKPNSD VCPGDVSHVP LLAGKHKEAR LAKIDVFDSD 240 SPHYTDGNHS SLIEPTDSYI AFEPNHSDFS QDEEDYNLSK SLLRPPIFFP KFEVDCYYDA 300 HSNSCNLALP AEDQSFWSSL Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	141	RRARFKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	5e-42	HD-ZIP family protein