PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775586.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

YABBY

Protein Properties

Length: 218aa MW: 24482.6 Da PI: 6.8581

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775586.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	228.1	2.3e-70	6	170	2	169
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakas....qllaaeshldeslkeelleelkveeenlksnvekeesa 92 ++f+ +eq+CyvqC+fC+til+vsvP +sl++vvtvrCGhCtsllsvn++kas qlla+ h ++++ +e ++++ + + +++ XP_022775586.1 6 HLFDLPEQICYVQCGFCTTILLVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASfvplQLLASLGH----------DDEQPKEGAFSEEMAAPRKT 90 7899*******************************************9998444444444444..........45555555555555555554 PP YABBY 93 stsvssekl..senedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 s +s + + s+ne+e++ rv p v++PPekrqr+Psaynrfikeei+r+ka+nP+i h+eafs+aaknWahfP++h++ XP_022775586.1 91 SDRRSPSLMtsSDNEEEDTVRVNPtVNKPPEKRQRAPSAYNRFIKEEIRRLKAQNPNIRHKEAFSTAAKNWAHFPPMHNK 170 4444443334478889999998887***************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 218 aa Download sequence
MSTMNHLFDL PEQICYVQCG FCTTILLVSV PCSSLSMVVT VRCGHCTSLL SVNMMKASFV 60 PLQLLASLGH DDEQPKEGAF SEEMAAPRKT SDRRSPSLMT SSDNEEEDTV RVNPTVNKPP 120 EKRQRAPSAY NRFIKEEIRR LKAQNPNIRH KEAFSTAAKN WAHFPPMHNK GDGESCGQNE 180 GEALWNSDAT DQLVHIEGND FRERKAARNS IWAKSPFE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23420.1	1e-88	YABBY family protein