PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775613.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 136aa MW: 15622.4 Da PI: 11.621

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00049	69	117	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +rr h+e rr +++i ++ +L++l+P++ +s l+ +++ eYI sL XP_022775613.1 69 KRRPHSEGSRRPMNHIEQKVKTLKKLIPNN---DSMGLD--GLFRETAEYILSL 117 68999************************7...555555..5556666666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 136 aa Download sequence
MGISPLPLPS FDSNGIQGNE EMSESNGSLW SKLLEAPPKR RLKAKKQRSV ARKKVRRVRC 60 RRPRSIVMKR RPHSEGSRRP MNHIEQKVKT LKKLIPNNDS MGLDGLFRET AEYILSLQMR 120 VKVMQIMVKV LTGSDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	39	54	KRRLKAKKQRSVARKK
2	41	54	RLKAKKQRSVARKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	6e-06	bHLH family protein