PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775639.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 304aa MW: 34159.6 Da PI: 5.4897

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775639.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.2e-16	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l+d +k +G g W++I++ g++R++k+c++rw++yl XP_022775639.1 15 RGAWTAIEDKILIDFIKAHGEGKWRSIPKAAGLKRCGKSCRLRWLNYL 62 89********************************************97 PP
2	Myb_DNA-binding	50.9	3.7e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_022775639.1 68 RGNITRDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTVL 113 7899****************.*****.**********975 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MGRKPCCSKE EGLNRGAWTA IEDKILIDFI KAHGEGKWRS IPKAAGLKRC GKSCRLRWLN 60 YLRPDIKRGN ITRDEEDLII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN TVLSKRAQVK 120 EFNHINKNEE KQRIINCSRK APTGSGVIHA KAERCTEVFI SPKQQIMIGK DDNDIVHTVP 180 STDAKLVHET AVESESRDGS FTLLSSKEEN PSSKFSMDFG IGEISISEAL ASDDLTQLSD 240 FDLCDMNSTV IYEYGTNDCG QALLPPQLMV ENWSGNDCVE LEANLDSDFG FLAAFLESTE 300 DLTF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	8e-61	MYB family protein