PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775705.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 316aa MW: 36588.5 Da PI: 7.3434

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.9	1.5e-19	43	133	2	86
trihelix 2 WtkqevlaLiearremeerlrr......gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt qe+l+Li+a+r ++er + +k + +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ +++++++s ++ p + ++e XP_022775705.1 43 WTIQETLTLITAKRLDDERRAKpstsspSKPGELRWKWVENYCWDHGCCRSQNQCNDKWDNLLRDYKKVRQYQSSQSQPSDHHLPSYWSME 133 ************77777775333333468899**************************************999999****998 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MSNPPPPPPT SPLPSSLHHQ PPYITATTTL TTTNNREYRK GNWTIQETLT LITAKRLDDE 60 RRAKPSTSSP SKPGELRWKW VENYCWDHGC CRSQNQCNDK WDNLLRDYKK VRQYQSSQSQ 120 PSDHHLPSYW SMERHQRKLH NLPTNMSLEV FEALNDVLQT KYNTHQHQQQ QQQQQQQQQQ 180 QQPQQPSVSQ SSEQLPVRTD QQAPEIEAPV TIPEESDSLE TESSTENLDS ETKRKKVRKL 240 GSSIMRSASV LAQTLKSCEE KKEKRHQEVM ELEQRRLQVE ETRNEVNQKG INDLVAAMTN 300 LSGAIQSLIA THYDQT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	233	264	KRKKVRKLGSSIMRSASVLAQTLKSCEEKKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-45	Trihelix family protein