PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775750.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 435aa MW: 47827.7 Da PI: 6.9173

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775750.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.3	4.2e-16	238	283	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ +L++l+P+a K +Ka++L +++eY+k+Lq XP_022775750.1 238 HNLSERRRRDRINQKMKTLQKLVPNA-----SKTDKASMLDEVIEYLKQLQ 283 9**********************9.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSHCIVPNWN LKHQRQEQVE EEEEGNRSSH VLNPSNTHLV PMSSNYEVAE LTWENGQLAM 60 HGLSGLLPTA LTKPTWGRSS DTLESLVHQA TCHDQNQNFN FLQHDNTPAN RSSDIAASSG 120 GNWAESTGGL PMAAAALLKK RARSDSDQCW KNYLSGGIQE DRADRSACAS ASATLCRDND 180 TTLMTWASHE SPQSMKTKTT DEDSACHNGS ETRDEDRETG GETGRSHSTR RSRAAAIHNL 240 SERRRRDRIN QKMKTLQKLV PNASKTDKAS MLDEVIEYLK QLQAQVQMMS MRSMPQMMMP 300 LGMQQHLQMS ILARMGMGVG LGMGMGMLDI NSMAPNASHS LPPLMHPSPV TAPNPTFLPP 360 PFVAPPIVPP RMAAQANSNA TSNATVPLPD PYCAFLAQSM NMDLYSKMAA LYRPQINQTT 420 QTASSPSRSN NVQED

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSHCIVPNWN LKHQRQEQVE EEEEGNRSSH VLNPSNTHLV PMSSNYEVAE LTWENGQLAM  60
HGLSGLLPTA LTKPTWGRSS DTLESLVHQA TCHDQNQNFN FLQHDNTPAN RSSDIAASSG  120
GNWAESTGGL PMAAAALLKK RARSDSDQCW KNYLSGGIQE DRADRSACAS ASATLCRDND  180
TTLMTWASHE SPQSMKTKTT DEDSACHNGS ETRDEDRETG GETGRSHSTR RSRAAAIHNL  240
SERRRRDRIN QKMKTLQKLV PNASKTDKAS MLDEVIEYLK QLQAQVQMMS MRSMPQMMMP  300
LGMQQHLQMS ILARMGMGVG LGMGMGMLDI NSMAPNASHS LPPLMHPSPV TAPNPTFLPP  360
PFVAPPIVPP RMAAQANSNA TSNATVPLPD PYCAFLAQSM NMDLYSKMAA LYRPQINQTT  420
QTASSPSRSN NVQED

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	144	LKKRARS
2	242	247	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61270.1	4e-28	bHLH family protein