PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775777.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 380aa MW: 42160.3 Da PI: 6.9775

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775777.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.3	7.5e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ +++ g+ R++k+c++rw +yl XP_022775777.1 14 KGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWINYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++++lG++ W++Ia +++ +Rt++++k++w+++l XP_022775777.1 67 RGKFSLQEEQTIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWINY 60 LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG 120 IDPVTHKPKT DALGSASGNP RDAANLSHMA QWESARLEAE ARLVRESKLI SNPPQNQLAG 180 ASSSSVPQLT NNAVVAAPAT RPQCLDVLKA WQGVVTGLFT FNSDNLQSPT STLNFMENTL 240 AISSVNGFND NFLGNSSIPC EAGDIVKVDS SANEWKCLEK SNQIPELNRE RLDNSMGLHE 300 MAYSSEGAWF QDSYRAENMM ECYSDIMVCD SGDHLQSSSM AAPGQNLNGT NYASTFEENK 360 NYWNTILNLV NASPSDSPVF

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MGRSPCCEKV GLKKGPWTPE EDQKLLAYIE EHGHGSWRAL PAKAGLQRCG KSCRLRWINY  60
LRPDIKRGKF SLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLTKMG  120
IDPVTHKPKT DALGSASGNP RDAANLSHMA QWESARLEAE ARLVRESKLI SNPPQNQLAG  180
ASSSSVPQLT NNAVVAAPAT RPQCLDVLKA WQGVVTGLFT FNSDNLQSPT STLNFMENTL  240
AISSVNGFND NFLGNSSIPC EAGDIVKVDS SANEWKCLEK SNQIPELNRE RLDNSMGLHE  300
MAYSSEGAWF QDSYRAENMM ECYSDIMVCD SGDHLQSSSM AAPGQNLNGT NYASTFEENK  360
NYWNTILNLV NASPSDSPVF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15310.1	1e-117	MYB family protein