PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775796.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HD-ZIP

Protein Properties

Length: 289aa MW: 32954.9 Da PI: 6.2423

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775796.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56	6.5e-18	81	134	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k XP_022775796.1 81 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 134 456899***********************************************9 PP
2	HD-ZIP_I/II	130.9	4.9e-42	80	172	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+y+a+k++n++L++++++L++e+++ XP_022775796.1 80 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQYEAIKADNDALQAQNQRLHAEIMA 172 69**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MSCNGMAFFP ANFMLPTPHE DDHHHPPTSI NQMLPSCTPQ DFHGVASFLG KRSMSFSGID 60 VCEEANGEDD LSDDGSQAGE KKRRLNMEQV KTLEKNFELG NKLEPERKMQ LARALGLQPR 120 QIAIWFQNRR ARWKTKQLEK DYDLLKRQYE AIKADNDALQ AQNQRLHAEI MALKNREPTE 180 SINLNKETEG SCSNRSENSS DVKLDISRTP AIDSPLPTHP TSRTFFPTSI RPPSGGFAQL 240 FQAASSRTDN HLQCQKVDQM VKEESLSNMF CTIEDQTGFW PWLEQQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	129	137	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-120	HD-ZIP family protein