PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775829.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 482aa MW: 52733.6 Da PI: 6.0638

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775829.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	20	67	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++vk++G g+W+++ + g+ R++k+c++rw ++l XP_022775829.1 20 KGPWTAAEDAILMEYVKMHGEGNWNAVQKNSGLMRCGKSCRLRWANHL 67 79******************************************9986 PP
2	Myb_DNA-binding	50.5	4.8e-16	73	116	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ ++++++++lG++ W++ a+ ++ gRt++++k++w++ XP_022775829.1 73 KGSFSPEEERIIIELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 116 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MKSNSAGVSS DRISTHGLKK GPWTAAEDAI LMEYVKMHGE GNWNAVQKNS GLMRCGKSCR 60 LRWANHLRPN LKKGSFSPEE ERIIIELHAK LGNKWARMAA QLPGRTDNEI KNYWNTRLKR 120 RQRAGLPVYP QQVAEEVAGF LLQQQQQQHI QQYQGISSSS LSSNFLSSSQ GKRHDYISSL 180 SLLDSMNSSS AGQHQAIPSF YSNIYAGSCS NNIGFALPPS SPFVSSSSNL YNQNITAQLP 240 APSFQFNSGS FEHSLSFSSL LMGAQTQPID FVPDPGLKAE LASSQTLPQR TSTPTSSYAS 300 SGGVCRFTSS DNTNNYCEPE GSSGLLDALL VESRALSRNE RNKDGEEFPQ VIDKGKGIMD 360 AANVEKEGED NGSKCDVEKW WDDFSLSQSS IGMIQPSDES KEEMNSMDDD LLSLLNSFPS 420 SMPLPEWHIK TTRMSNGSSP GGMTDGNTAL DYEQNISPAP AATANLDRAF GSCCWKNMPG 480 IC

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MKSNSAGVSS DRISTHGLKK GPWTAAEDAI LMEYVKMHGE GNWNAVQKNS GLMRCGKSCR  60
LRWANHLRPN LKKGSFSPEE ERIIIELHAK LGNKWARMAA QLPGRTDNEI KNYWNTRLKR  120
RQRAGLPVYP QQVAEEVAGF LLQQQQQQHI QQYQGISSSS LSSNFLSSSQ GKRHDYISSL  180
SLLDSMNSSS AGQHQAIPSF YSNIYAGSCS NNIGFALPPS SPFVSSSSNL YNQNITAQLP  240
APSFQFNSGS FEHSLSFSSL LMGAQTQPID FVPDPGLKAE LASSQTLPQR TSTPTSSYAS  300
SGGVCRFTSS DNTNNYCEPE GSSGLLDALL VESRALSRNE RNKDGEEFPQ VIDKGKGIMD  360
AANVEKEGED NGSKCDVEKW WDDFSLSQSS IGMIQPSDES KEEMNSMDDD LLSLLNSFPS  420
SMPLPEWHIK TTRMSNGSSP GGMTDGNTAL DYEQNISPAP AATANLDRAF GSCCWKNMPG  480
IC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	1e-72	MYB family protein