PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775895.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 324aa MW: 36672.3 Da PI: 9.1832

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60	5.1e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+ +++++G g+W+t +++ g+ R++k+c++rw++yl XP_022775895.1 15 KGPWTPDEDQKLLAYIEEHGFGNWRTLPEKAGLQRCGKSCRLRWNNYL 62 79*********************************************7 PP
2	Myb_DNA-binding	50.5	4.6e-16	68	112	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ E++ ++++++ lG++ W+tIa++++ +Rt++++k++w+++ XP_022775895.1 68 RGKFSLHEEQTIIRLHAFLGNR-WSTIAAHLP-KRTDNEIKNYWNTH 112 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MARSTGCSKN TLLKKGPWTP DEDQKLLAYI EEHGFGNWRT LPEKAGLQRC GKSCRLRWNN 60 YLRPDVKRGK FSLHEEQTII RLHAFLGNRW STIAAHLPKR TDNEIKNYWN THIKKRFTKM 120 GIDPTTHKPK SNLLSSTGRN TRTLSHMAQW ERARLEAEAR LVRESKKLVS TQNNKPSLSA 180 RVVKSSKATA SSTRSPCLDV LKAWQSVVAG MFAISTNNLE PPPSTFVNNS IPIVVGCHES 240 SANELDLART GSVTCIGGFA QDELMLDDDR SNYQVPELNE RFDYSMSLHD TTYHWTAATG 300 NIVEDFSDIS VHDFDYPIQQ GDIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01140.1	2e-80	MYB family protein