PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022775928.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 381aa MW: 42829.9 Da PI: 5.0314

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022775928.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23	1.7e-07	17	58	4	39
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 r C++++ +l+C++++++lC+dC +H H++ XP_022775928.1 17 RSCDTCQAAACTLYCHTDSTYLCNDCDKRIHAAnpmalsHQR 58 68****99*******************65777777776 PP
2	zf-B_box	27.5	6.7e-09	58	104	2	42
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvpl 42 + ++C+ +e+ ++ C + lC +C ++H + Ht+vp+ XP_022775928.1 58 RVWICAACENAPAVVTCSADAASLCINCDIQIH-SvnplarrHTRVPI 104 5789***************************.448888899997 PP
3	CCT	69.8	6.8e-24	315	358	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Re+++lRY+eKrk RkFeKkirY+sRKa+A++RpRvKGrF++++ XP_022775928.1 315 REEKVLRYREKRKARKFEKKIRYASRKAYADTRPRVKGRFARKT 358 9****************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MLKLGSGGDG YPSNWARSCD TCQAAACTLY CHTDSTYLCN DCDKRIHAAN PMALSHQRVW 60 ICAACENAPA VVTCSADAAS LCINCDIQIH SVNPLARRHT RVPIPPLSGL ACSSLSTHQD 120 DRVPGPMFDT GNEIAAPTML NEEFDEDETD SWLLLEPDNT DNPTMSGFTY SEQFDEYMDV 180 VDTSTKYQCQ EQCSDQQQLL CVNYQEDSGS DSVVPVQTFE AKKQPQQEEK QRQQQQTHHQ 240 LQTVYFNTEN RGSNAAFINT SSSSMSVPKL LITAGILPNA TSNIPNSYTR FPTGTADLFP 300 DPLLLMPLQF TSMNREEKVL RYREKRKARK FEKKIRYASR KAYADTRPRV KGRFARKTDM 360 EIEDDQLFSK EDYGYGIVPS L

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MLKLGSGGDG YPSNWARSCD TCQAAACTLY CHTDSTYLCN DCDKRIHAAN PMALSHQRVW  60
ICAACENAPA VVTCSADAAS LCINCDIQIH SVNPLARRHT RVPIPPLSGL ACSSLSTHQD  120
DRVPGPMFDT GNEIAAPTML NEEFDEDETD SWLLLEPDNT DNPTMSGFTY SEQFDEYMDV  180
VDTSTKYQCQ EQCSDQQQLL CVNYQEDSGS DSVVPVQTFE AKKQPQQEEK QRQQQQTHHQ  240
LQTVYFNTEN RGSNAAFINT SSSSMSVPKL LITAGILPNA TSNIPNSYTR FPTGTADLFP  300
DPLLLMPLQF TSMNREEKVL RYREKRKARK FEKKIRYASR KAYADTRPRV KGRFARKTDM  360
EIEDDQLFSK EDYGYGIVPS L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	4e-69	CO-like family protein