PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776232.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 380aa MW: 42023.1 Da PI: 8.6736

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.7	9.1e-40	89	164	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C v++C++dl ++++yhrrhkvCe hsk+++v+++g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+ XP_022776232.1 89 CLVDECSSDLRNCRDYHRRHKVCELHSKTAQVMIKGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPL 164 *************************************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MDWNLKATSW DFTEIDEEAV PSIDAVNGSS SYKVPRNKGG FSVDLKLGQV GNSGEEPLNK 60 WKEPGGLKME SSPSKRSRTT NNGTHQVSCL VDECSSDLRN CRDYHRRHKV CELHSKTAQV 120 MIKGQKQRFC QQCSRFHSLE EFDEGKRSCR KRLDGHNRRR RKPLPDPPSC SGSYFSNYQG 180 TQMLPLSSLH VYPSTTVVKP TWPGVANSET KSRLLNQQQQ LHSPGKQNLI LGSSSSNYRG 240 KQFTFLQGEN ITLQSQTPPE ASVCQPLLRA VPFSEGSGGS HSMFCDRLTT PVQDSDCALS 300 LLSSPQTQTS GISLRNMVQP HSFPLVQPLG PSLQNRVLEP MDSVVANGRD PVVHCPTTFH 360 MGSGGSSGSE APQTLPLHWQ

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MDWNLKATSW DFTEIDEEAV PSIDAVNGSS SYKVPRNKGG FSVDLKLGQV GNSGEEPLNK  60
WKEPGGLKME SSPSKRSRTT NNGTHQVSCL VDECSSDLRN CRDYHRRHKV CELHSKTAQV  120
MIKGQKQRFC QQCSRFHSLE EFDEGKRSCR KRLDGHNRRR RKPLPDPPSC SGSYFSNYQG  180
TQMLPLSSLH VYPSTTVVKP TWPGVANSET KSRLLNQQQQ LHSPGKQNLI LGSSSSNYRG  240
KQFTFLQGEN ITLQSQTPPE ASVCQPLLRA VPFSEGSGGS HSMFCDRLTT PVQDSDCALS  300
LLSSPQTQTS GISLRNMVQP HSFPLVQPLG PSLQNRVLEP MDSVVANGRD PVVHCPTTFH  360
MGSGGSSGSE APQTLPLHWQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	146	163	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	8e-67	SBP family protein