PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776242.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 380aa MW: 43597.9 Da PI: 6.3338

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776242.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	84.4	1.4e-26	72	153	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W ++e++ Li++rrem++ ++++k++k+lWe++s+kmre+gf rsp++C++kw+nl k++kk k+++++ s +++y +++e XP_022776242.1 72 WVQDETRSLIAFRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGS---GSAKMSYCKEIE 153 *******************************************************************985...344667777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MYLSEKPRPI DLYKEEGPAT ARDMIIEVTS NGDLPPHHHP PPHQQQQQQM ILGESSGEDP 60 EIKAPKKRAE TWVQDETRSL IAFRREMDSL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC 120 TDKWRNLLKE FKKAKHQDRG SGSAKMSYCK EIEEILRERT KNAYKSPNPP PKVDSFMHFS 180 DKGFEDTGIS FGPVEDSGRP PLNLERRLDH DGHPLAITAA EAVAAGGVPP WNWRETPGNG 240 GDCQSYGGRV ITVKFGDYTR RIGIDGTADA IREAIKSAFR LRTKRAFWLE DEDHIVRSLD 300 REMPLGNYTL HLDEGLAIKV CLYDESDHIP VHTEEIFYTE DDYREYLVRR GYTGLREIDG 360 YRNIDNMDDL RTNAIYRGVS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MYLSEKPRPI DLYKEEGPAT ARDMIIEVTS NGDLPPHHHP PPHQQQQQQM ILGESSGEDP  60
EIKAPKKRAE TWVQDETRSL IAFRREMDSL FNTSKSNKHL WEQISAKMRE KGFDRSPTMC  120
TDKWRNLLKE FKKAKHQDRG SGSAKMSYCK EIEEILRERT KNAYKSPNPP PKVDSFMHFS  180
DKGFEDTGIS FGPVEDSGRP PLNLERRLDH DGHPLAITAA EAVAAGGVPP WNWRETPGNG  240
GDCQSYGGRV ITVKFGDYTR RIGIDGTADA IREAIKSAFR LRTKRAFWLE DEDHIVRSLD  300
REMPLGNYTL HLDEGLAIKV CLYDESDHIP VHTEEIFYTE DDYREYLVRR GYTGLREIDG  360
YRNIDNMDDL RTNAIYRGVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13450.1	0.0	Trihelix family protein