PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776333.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 481aa MW: 53031 Da PI: 8.1245

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.6	2.8e-41	187	264	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+ak+yh++h+vCe hsk+p+v+v gle+rfCqqCsrfh lsefD++krsCrrrL++hn+rrrk+q+ XP_022776333.1 187 RCQVEGCNLDLSSAKDYHKKHRVCESHSKSPKVIVGGLERRFCQQCSRFHGLSEFDQKKRSCRRRLSDHNARRRKPQT 264 6**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MSSISLMEWN AKTPLQWDWE NLMMFNVTPT EIPRKLRPVE WDIDGEGGID SGSLYSSGAA 60 GGSGGSGSDL GLASLSKSSK SASINSSSMG EVKTAKFTLE AFEAIPDDII NKKELSKVEL 120 TGSSPTLEAS VGSGEPLLSL KLGKRTYFED VSAGSNAKTS SYSAAPEPSP TSTKRSKPNC 180 QSTHVPRCQV EGCNLDLSSA KDYHKKHRVC ESHSKSPKVI VGGLERRFCQ QCSRFHGLSE 240 FDQKKRSCRR RLSDHNARRR KPQTEAIHFN PASLSSSSYD GKQQMSFVWN KVPFLHNARP 300 NENFTWEGTF DSKSSQMKGY TPTKAGNVNG QLQLPGNQLL NSITMRCHDS NRLLPSKGKH 360 NTAEVLNQGV EESTVASNMG TRQDFHRALS LLSNDSWVSC EPKHASLAYS MHANPTSVSQ 420 PEMNAISQGF SRALSENWQM EQQATESQVH TTLHGDGNNH FQEFQLLKAP YDCDFYSNQM 480 N

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MSSISLMEWN AKTPLQWDWE NLMMFNVTPT EIPRKLRPVE WDIDGEGGID SGSLYSSGAA  60
GGSGGSGSDL GLASLSKSSK SASINSSSMG EVKTAKFTLE AFEAIPDDII NKKELSKVEL  120
TGSSPTLEAS VGSGEPLLSL KLGKRTYFED VSAGSNAKTS SYSAAPEPSP TSTKRSKPNC  180
QSTHVPRCQV EGCNLDLSSA KDYHKKHRVC ESHSKSPKVI VGGLERRFCQ QCSRFHGLSE  240
FDQKKRSCRR RLSDHNARRR KPQTEAIHFN PASLSSSSYD GKQQMSFVWN KVPFLHNARP  300
NENFTWEGTF DSKSSQMKGY TPTKAGNVNG QLQLPGNQLL NSITMRCHDS NRLLPSKGKH  360
NTAEVLNQGV EESTVASNMG TRQDFHRALS LLSNDSWVSC EPKHASLAYS MHANPTSVSQ  420
PEMNAISQGF SRALSENWQM EQQATESQVH TTLHGDGNNH FQEFQLLKAP YDCDFYSNQM  480
N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	261	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	2e-87	SBP family protein