PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776346.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CAMTA

Protein Properties

Length: 1083aa MW: 120256 Da PI: 5.2844

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776346.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.1	2.6e-56	14	128	4	117
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+frkDG+sw+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+np+fqrr XP_022776346.1 14 EaQARWLKPAEVLFILQNHEKYQLTQEPPQKPTSGSLFLFNKRVLRFFRKDGHSWRKKKDGRTVGEAHERLKVGNVETLNCYYAHGEQNPSFQRR 108 4499***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylev 117 +yw+L+ ++e+ivlvhy+e XP_022776346.1 109 SYWMLDPAYEHIVLVHYREI 128 ***************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1083 aa Download sequence
MEQSGYDINN LFREAQARWL KPAEVLFILQ NHEKYQLTQE PPQKPTSGSL FLFNKRVLRF 60 FRKDGHSWRK KKDGRTVGEA HERLKVGNVE TLNCYYAHGE QNPSFQRRSY WMLDPAYEHI 120 VLVHYREINE AKHSLASIVQ SPVSSSAFSP SPNSYNSQNP GSNSLACDVH QTYQNLSSPG 180 SVEVSSDIVI KHNEIDNSVE YTIPADLQVS QALKRIEEQL SLNEDSFKDS SASIVQSPVS 240 SSAFSPSPNS YTSQNRGSNS LASDVHETFQ NLSSPGSVEV SSDIFMKNNG IDNTVEYICP 300 ADLQVSHALK RLEEQLSLNE DSFKEMSPFC SLDGDTDDSK FLEYGRETAK QDPQEDLLYE 360 PDDIIQDHLY SQPARVENYS NNFALLSDGG KNGEHSQVYS NDNSDGSKES LYWKNVLDSC 420 KNQSGVDSQG RPLSSSRTGP TEQQEQSVWL NFNGSDLKDS SVLLCQEAEN VEIPSYSSAI 480 QAIGTNSDYY TMLCNQDNIE IPLATDSSLT VAQKQKFTIW EISPEWGYSS EATKVIIVGS 540 FLCDPSESES AWACMFGETE VPLEIIQEGV VCCKAPPHLP GKVTLCITDG NRESCSEIRE 600 FEYRVNASSC ARCNLSHTEV PKSLEELLLL VRFVQMLLSD SSLQKDSIES HLLRKSKADD 660 DSWSHVIEAL LIGSGTSSGI VDWLLQELLK DKLQLWLCSR SKETGDRSVC TMSKKDQGII 720 HMAAGLGFEW ALNPILNHGV SINFRDINGW TALHWAARFG REKMVAALIA SGASAGAVTD 780 PTSQDLSGKT AASIAASSGH KGLAGYLSEV ALTSHLSSLT LEESELSKGS AAVQAEMAVN 840 SISKGSLATS EDQLSLKDTL AAVRNATQAA ARIQNAFRAH SFRKRQQKEV AATAASVDEY 900 GISSDEIKGL STMSKLAFGN ARHYNLAALS IQKKFRGWKG RKDFLSLRQK VIKIQAHVRG 960 YQIRKNYKVI CWAVGVLDKV VLRWRRKGVG LRGFRSEPEP IDESEDEDIL KVFRKQKVDV 1020 AVNEALSRVL SMVDSPDARQ QYRRLLERYR QAKAELGNTN EPAASTSLSD IDDMESDDFF 1080 QFP

Sequence ? help Back to Top

Protein Sequence Length: 1083 aa Download sequence

MEQSGYDINN LFREAQARWL KPAEVLFILQ NHEKYQLTQE PPQKPTSGSL FLFNKRVLRF  60
FRKDGHSWRK KKDGRTVGEA HERLKVGNVE TLNCYYAHGE QNPSFQRRSY WMLDPAYEHI  120
VLVHYREINE AKHSLASIVQ SPVSSSAFSP SPNSYNSQNP GSNSLACDVH QTYQNLSSPG  180
SVEVSSDIVI KHNEIDNSVE YTIPADLQVS QALKRIEEQL SLNEDSFKDS SASIVQSPVS  240
SSAFSPSPNS YTSQNRGSNS LASDVHETFQ NLSSPGSVEV SSDIFMKNNG IDNTVEYICP  300
ADLQVSHALK RLEEQLSLNE DSFKEMSPFC SLDGDTDDSK FLEYGRETAK QDPQEDLLYE  360
PDDIIQDHLY SQPARVENYS NNFALLSDGG KNGEHSQVYS NDNSDGSKES LYWKNVLDSC  420
KNQSGVDSQG RPLSSSRTGP TEQQEQSVWL NFNGSDLKDS SVLLCQEAEN VEIPSYSSAI  480
QAIGTNSDYY TMLCNQDNIE IPLATDSSLT VAQKQKFTIW EISPEWGYSS EATKVIIVGS  540
FLCDPSESES AWACMFGETE VPLEIIQEGV VCCKAPPHLP GKVTLCITDG NRESCSEIRE  600
FEYRVNASSC ARCNLSHTEV PKSLEELLLL VRFVQMLLSD SSLQKDSIES HLLRKSKADD  660
DSWSHVIEAL LIGSGTSSGI VDWLLQELLK DKLQLWLCSR SKETGDRSVC TMSKKDQGII  720
HMAAGLGFEW ALNPILNHGV SINFRDINGW TALHWAARFG REKMVAALIA SGASAGAVTD  780
PTSQDLSGKT AASIAASSGH KGLAGYLSEV ALTSHLSSLT LEESELSKGS AAVQAEMAVN  840
SISKGSLATS EDQLSLKDTL AAVRNATQAA ARIQNAFRAH SFRKRQQKEV AATAASVDEY  900
GISSDEIKGL STMSKLAFGN ARHYNLAALS IQKKFRGWKG RKDFLSLRQK VIKIQAHVRG  960
YQIRKNYKVI CWAVGVLDKV VLRWRRKGVG LRGFRSEPEP IDESEDEDIL KVFRKQKVDV  1020
AVNEALSRVL SMVDSPDARQ QYRRLLERYR QAKAELGNTN EPAASTSLSD IDDMESDDFF  1080
QFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein