PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022776351.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 198aa MW: 23042.3 Da PI: 6.0512

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022776351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	92.2	2.5e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ks rqvtfskRr g++KKA+ELSvLCd+e+a++ifss+g+lye+ss XP_022776351.1 9 KRIEDKSSRQVTFSKRRSGLIKKAHELSVLCDVEIALVIFSSRGRLYEFSS 59 79***********************************************96 PP
2	K-box	46	2.3e-16	73	163	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +e+++e ++ + L + +e L q +l +e+Lsl +L +Le+qL+++l +iR++K++l++e++ +lq+kek l+ en+ L++++e XP_022776351.1 73 HHEKESEASKDVNEALLSHTELLHIVQSQLEEPTVEQLSLMDLVHLEKQLDRALYEIRARKTQLMMESVLTLQEKEKLLKAENELLEREIE 163 4555666666666778999999999999************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MGRRKVEMKR IEDKSSRQVT FSKRRSGLIK KAHELSVLCD VEIALVIFSS RGRLYEFSSA 60 DSLAKILERY QSHHEKESEA SKDVNEALLS HTELLHIVQS QLEEPTVEQL SLMDLVHLEK 120 QLDRALYEIR ARKTQLMMES VLTLQEKEKL LKAENELLER EIEAMEKNED DRIEVVIGFS 180 HPEHLGHQNQ QQTLSLLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65060.1	7e-48	MIKC_MADS family protein